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PhyloTree.org -
mtDNA tree Build 17 (18 Feb 2016): subtree N2 |
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Citation: van Oven M, Kayser M.
2009. Updated comprehensive phylogenetic tree of global human mitochondrial
DNA variation. Hum Mutat 30(2):E386-E394. |
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Nucleotide position numbers are consistent
with both the rCRS and the RSRS reference sequences. |
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Mutations are given in forward evolutionary
time direction in the format [ancestral base][position number][derived base],
e.g. "G15043A". |
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In case of a transversion, the derived allele
is shown in lowercase instead of uppercase, e.g. "C5178a". |
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Insertions are indicated by the position
number preceding the insertion followed by a dot (.), the relative insert
position, and the inserted base(s), e.g. "2156.1A". |
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Deletions are indicated by the letter
"d" following the (range of) position number(s) involved, e.g.
"A249d" or "8281-8289d". |
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Mutations that are reversions to an ancestral
state (back mutations) are indicated with an exclamation mark (!), two
exclamation marks for a double back mutation (!!), etc., e.g.
"A15301G!". |
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Coding-region mutations (np 577-16023) are
shown in black; control-region mutations (np 16024-576) in blue. |
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Mutations between brackets () are
recurrent/unstable within the respective clade, or are yet uncertain based on
current data. |
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Mutation motifs in italic are preliminary and are likely to be further refined as
additional sequences become available. |
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The mutations 309.1C(C), 315.1C, AC indels at
515-522, A16182c, A16183c, 16193.1C(C) and C16519T/T16519C were not
considered for phylogenetic reconstruction and are therefore excluded from
the tree. |
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Accession numbers provided at the tips of
branches are representative examples of mtDNA sequences available at GenBank
or from individuals included in HapMap/1000Genomes. |
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It may be convenient to use the Find function
(Ctrl+F) of your browser to search for a particular mutation or haplogroup. |
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Example accessions |
mt-MRCA (RSRS) |
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L1'2'3'4'5'6 |
C146T
C182T
T4312C T10664C C10915T
A11914G G13276A G16230A |
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L2'3'4'5'6 |
C152T A2758G
C2885T G7146A T8468C |
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L2'3'4'6 |
C195T
A247G
A825t T8655C A10688G
C10810T G13105A T13506C
G15301A A16129G
T16187C C16189T |
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L3'4'6 |
G4104A
A7521G |
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L3'4 |
T182C! T3594C
T7256C T13650C T16278C |
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L3 |
A769G
A1018G C16311T |
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N |
G8701A
C9540T G10398A C10873T
A15301G! |
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R |
T12705C
T16223C |
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R0 |
G73A A11719G |
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HV |
T14766C |
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H |
G2706A
T7028C |
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H2 |
G1438A |
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H2a |
G4769A |
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H2a2 |
G750A |
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H2a2a |
G8860A
G15326A |
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H2a2a1 |
G263A |
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rCRS |
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N2 |
A189G G709A
G5046A C11674T T12414C |
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N2a |
T199C C739T
T7581C G15106A G16153A G16319A |
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EU787451 |
JF904935 |
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N2a1 |
A14152G
C16111T |
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KC911573 |
JF930639 |
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N2a2 |
A4065G |
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JN207845 |
KC911368 |
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W |
T195C!
T204C G207A T1243C A3505G
G5460A G8251A G8994A
A11947G G15884c C16292T |
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KF056262 |
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W1 |
C7864T |
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JQ702793 |
KF146268 |
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W1a |
T5495C
C12669T |
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AY339475 |
AY339491 |
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W1b |
A227G T4928C
G9612A |
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AY339462 |
AY339465 |
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W1b1 |
A10086G |
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AY339466 |
JQ702545 |
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T119C |
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FJ472633 |
JQ705036 |
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W1c |
A14148G |
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JQ702450 |
JQ245768 |
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W1c1 |
T11204C
A12648G C16184T |
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JQ702327 |
JQ704790 |
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W1i |
T5580C |
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KF146267 |
JQ702332 |
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W1d |
G189A!
C194T A200G T8383C C9278T
A14981c C16260T
T16292C! T16298C |
EF556154 |
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W1e |
A8659G
A8887G |
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JQ705839 |
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W1e1 |
C16295T |
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FJ543390 |
HM625692 |
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W1e1a |
A10398G!
T16324C |
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JQ702638 |
KF146263 |
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W1f |
T9950C |
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FJ384432 |
FJ348225 |
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W1g |
C16320T |
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JQ702249 |
JQ704975 |
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W1h |
G16145A |
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JQ898579 |
KF146270 |
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W1h1 |
G513c |
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JQ703970 |
KF146271 |
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C194T |
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EU086510 |
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W3 |
T1406C |
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W3a |
T15784C |
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JQ705313 |
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W3a1 |
A13263G |
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KF146273 |
JQ245760 |
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W3a1a |
C7151T |
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W3a1a1 |
G3421A |
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JQ705286 |
FJ472839 |
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W3a1a2 |
G5585A
A9127G |
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GU123000 |
JQ705642 |
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W3a1a3 |
T15109C |
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FJ821289 |
EF657508 |
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W3a1b |
T10245C |
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GU002155 |
AY714043 |
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T199C |
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W3a1c |
G7269A |
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JQ703058 |
JQ702804 |
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W3a1d |
A10398G |
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KF142470 |
JQ704160 |
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W3a2 |
T5291C
T16209C
G16255A |
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JQ705487 |
GU147938 |
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W3b |
T199C G12923t |
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KF146279 |
JQ245743 |
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W3b1 |
G189A! T7058C |
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JQ701824 |
JQ702298 |
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W4 |
G143A
T196C (C16286T) |
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KF146281 |
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W4a |
T192C |
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AY714018 |
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W4a1 |
G3531A
T16292C! |
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HM034304 |
EU400619 |
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W4b |
G7444A |
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KF146280 |
FJ348217 |
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W4c |
G11947A! |
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KF146282 |
NA20503 |
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W4d |
C16082T |
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KF146283 |
JQ245758 |
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W5 |
C6528T
A15775G |
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KF146285 |
KC911419 |
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W5a |
A10097G
T16362C |
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JQ701827 |
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W5a1 |
T10410C |
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JN583886 |
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W5a1a |
T4363C |
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EF652811 |
KF146284 |
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W5a1a1 |
A9275G |
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JF431251 |
EU135972 |
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W5a1a1a |
T57C
60.1T T139C |
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HM057816 |
GU828018 |
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W5a2 |
C150T |
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HG00148 |
GU726895 |
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W5a2b |
T3644C
A16177G |
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JQ705278 |
JF419335 |
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W5b |
60.1TT
64-65d
G11696A |
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JQ703283 |
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W5b1 |
T58C
G66c |
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EU744586 |
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W5b1a |
C195T!! T8618C
A9809G |
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JQ701912 |
JX153968 |
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W6 |
A4093G
T8614C (C16192T) T16325C |
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JQ245723 |
KF146287 |
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W6a |
T8610C |
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NA20804 |
JQ705209 |
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W6b |
T4646C
T6297C T8705C |
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JQ245761 |
FJ473381 |
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W6b1 |
G7269A |
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JQ245728 |
KF146290 |
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W6c |
C8002T
C8658T |
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JF275845 |
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W6c1 |
A8149G |
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KF700922 |
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W6c1a |
C16211T |
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KF553923 |
EU515252 |
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W6d |
C9211T |
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KF146288 |
JQ245762 |
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W7 |
G185A |
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HM352797 |
JQ702147 |
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W8 |
G5147A
G8697A |
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NA19776 |
JQ245778 |
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W9 |
C14097T |
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JQ245759 |
JQ702358 |
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